NanoPlot statistics report
NanoPlot reports
Summary statistics
|
dataset |
| Metrics |
|
| number_of_reads |
2000 |
| number_of_bases |
13329799.0 |
| median_read_length |
4942.0 |
| mean_read_length |
6664.9 |
| read_length_stdev |
5018.0 |
| n50 |
10403.0 |
| mean_qual |
10.3 |
| median_qual |
10.6 |
| longest_read_(with_Q):1 |
27779 (10.2) |
| longest_read_(with_Q):2 |
27156 (10.9) |
| longest_read_(with_Q):3 |
26598 (11.2) |
| longest_read_(with_Q):4 |
26208 (11.2) |
| longest_read_(with_Q):5 |
25656 (11.1) |
| highest_Q_read_(with_length):1 |
12.7 (1307) |
| highest_Q_read_(with_length):2 |
12.6 (1538) |
| highest_Q_read_(with_length):3 |
12.6 (3718) |
| highest_Q_read_(with_length):4 |
12.6 (12406) |
| highest_Q_read_(with_length):5 |
12.6 (3121) |
| Reads >Q5: |
1999 (100.0%) 13.3Mb |
| Reads >Q7: |
1953 (97.6%) 13.1Mb |
| Reads >Q10: |
1348 (67.4%) 9.4Mb |
| Reads >Q12: |
50 (2.5%) 0.2Mb |
| Reads >Q15: |
0 (0.0%) 0.0Mb |
Plots
Weighted histogram of read lengths
Non weighted histogram of read lengths
Read lengths vs Average read quality plot using dots
Read lengths vs Average read quality kde plot