##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename fastq_runid_64766c2b525372b212a266fe25ce856d398c991f_38_fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000 Sequences flagged as poor quality 0 Sequence length 172-44150 %GC 42 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 5.24975 5.0 4.0 7.0 3.0 8.0 2 7.69125 7.0 4.0 10.0 3.0 14.0 3 8.1555 8.0 5.0 11.0 3.0 14.0 4 9.1155 8.0 5.0 12.0 3.0 16.0 5 9.6505 9.0 6.0 12.0 4.0 16.0 6 8.787 8.0 5.0 11.0 4.0 15.0 7 11.03725 10.0 6.0 15.0 4.0 19.0 8 10.84 9.0 6.0 14.0 4.0 20.0 9 13.3985 12.0 7.0 18.0 5.0 25.0 10-999 16.822040969188535 15.15050505050505 9.777777777777779 22.83939393939394 6.045454545454546 30.181818181818183 1000-1999 16.891904288311675 15.298 9.769 22.91 6.123 30.281 2000-2999 16.97882749573465 15.425 9.813 22.979 6.258 30.327 3000-3999 16.971539637228044 15.411 9.756 22.976 6.235 30.347 4000-4999 16.92411874185914 15.359 9.697 22.92 6.232 30.245 5000-5999 16.8465690481979 15.271 9.604 22.831 6.152 30.145 6000-6999 16.98477165857214 15.382 9.714 22.986 6.246 30.263 7000-7999 16.92266779617275 15.339 9.68 22.841 6.244 30.1 8000-8999 16.9595378107283 15.37 9.696 22.874 6.284 30.178 9000-9999 17.021641892424405 15.449 9.743 22.962 6.293 30.17 10000-10999 17.054495565606327 15.486 9.747 23.022 6.246 30.176 11000-11999 17.005451264911375 15.381 9.642 22.935 6.156 30.192 12000-12999 16.868978945467457 15.25 9.588 22.735 6.174 29.704 13000-13999 16.790253871036477 15.102 9.417 22.626 6.017 29.781 14000-14999 17.09769397060867 15.43 9.746 22.86 6.199 29.924 15000-15999 17.015140000037192 15.228260869565217 9.66304347826087 22.516304347826086 6.266304347826087 29.032608695652176 16000-16999 16.92819719204156 NaN NaN NaN NaN NaN 17000-17999 17.39549565540164 NaN NaN NaN NaN NaN 18000-18999 17.779153905270874 NaN NaN NaN NaN NaN 19000-19999 17.37072847836203 NaN NaN NaN NaN NaN 20000-20999 17.853805941213256 NaN NaN NaN NaN NaN 21000-21999 17.459669581217085 NaN NaN NaN NaN NaN 22000-22999 17.39496613396131 NaN NaN NaN NaN NaN 23000-23999 16.991427464387456 NaN NaN NaN NaN NaN 24000-24999 16.325388696593276 NaN NaN NaN NaN NaN 25000-25999 16.49651475748195 NaN NaN NaN NaN NaN 26000-26999 16.69925 NaN NaN NaN NaN NaN 27000-27999 16.610254166666667 NaN NaN NaN NaN NaN 28000-28999 17.05658927738929 NaN NaN NaN NaN NaN 29000-29999 16.191172727272736 NaN NaN NaN NaN NaN 30000-30999 16.824513888888895 NaN NaN NaN NaN NaN 31000-31999 16.489944047619044 NaN NaN NaN NaN NaN 32000-32999 16.025349999999996 NaN NaN NaN NaN NaN 33000-33999 18.33108333333333 NaN NaN NaN NaN NaN 34000-34999 20.639 NaN NaN NaN NaN NaN 35000-35999 19.6395 NaN NaN NaN NaN NaN 36000-36999 20.3425 NaN NaN NaN NaN NaN 37000-37999 19.1405 NaN NaN NaN NaN NaN 38000-38999 20.715 NaN NaN NaN NaN NaN 39000-39999 19.521 NaN NaN NaN NaN NaN 40000-40999 19.361 NaN NaN NaN NaN NaN 41000-41999 21.51 NaN NaN NaN NaN NaN 42000-42999 20.043 NaN NaN NaN NaN NaN 43000-43999 20.988 NaN NaN NaN NaN NaN 44000-44150 18.483443708609272 NaN NaN NaN NaN NaN >>END_MODULE >>Per sequence quality scores fail #Quality Count 8 14.0 9 118.0 10 142.0 11 150.0 12 159.0 13 218.0 14 309.0 15 394.0 16 458.0 17 493.0 18 595.0 19 494.0 20 303.0 21 126.0 22 24.0 23 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 2.825 7.925 79.85 9.4 2 10.925 2.1 76.85 10.125 3 69.55 13.875000000000002 5.375 11.200000000000001 4 30.275000000000002 17.125 48.5 4.1000000000000005 5 11.5 10.549999999999999 74.125 3.8249999999999997 6 33.550000000000004 37.8 22.05 6.6000000000000005 7 15.299999999999999 12.775 53.625 18.3 8 23.7 25.85 31.574999999999996 18.875 9 12.225 12.875 28.975 45.925 10-999 21.592876937077644 28.129325330392756 29.227075769608803 21.0507219629208 1000-1999 21.985398444327082 28.13432786623469 28.72383985607938 21.156433833358847 2000-2999 21.73678446627617 28.391337404655044 28.73224928261349 21.139628846455295 3000-3999 21.81338217864454 28.216455454899585 28.980630402890935 20.989531963564932 4000-4999 21.84174819681497 28.164713003676084 28.904520459901452 21.0890183396075 5000-5999 22.056224031010977 27.904471553169103 28.992101684059048 21.04720273176088 6000-6999 21.76356401542749 28.02677902717134 29.121682554401268 21.087974402999905 7000-7999 21.943777452415812 28.219619326500734 28.8307467057101 21.005856515373353 8000-8999 21.8613167468446 28.039760940602036 29.036184650411634 21.06273766214173 9000-9999 22.337633057957714 27.59110746090793 28.8898819588708 21.181377522263556 10000-10999 22.213148990290076 27.613442775282635 28.659523843045605 21.513884391381684 11000-11999 21.82347024764183 28.084377633403108 28.924891945524234 21.167260173430833 12000-12999 22.362669433815423 27.849406576301966 28.940268499902714 20.847655489979893 13000-13999 22.423776884897187 27.989836917986295 28.505376979437486 21.081009217679036 14000-14999 21.966797846835846 28.06079522323246 29.19075405980006 20.781652870131634 15000-15999 22.077374172045733 27.779184069527062 29.417162384508288 20.726279373918914 16000-16999 21.939206304531382 28.914105877235624 28.308983445487808 20.837704372745183 17000-17999 20.697470052264002 29.41738741655489 29.139879438200516 20.74526309298059 18000-18999 21.419697311949403 28.659362999774114 29.111136209622767 20.809803478653716 19000-19999 21.597679002502602 28.604965340065995 28.706841184417424 21.090514473013975 20000-20999 21.194490029340095 29.315231985678054 29.374906758167985 20.115371226813863 21000-21999 20.66234288010102 29.50984331056649 29.294610572232106 20.533203237100384 22000-22999 20.98124098124098 28.12770562770563 29.404761904761905 21.486291486291485 23000-23999 21.988903444555753 27.637358403328964 27.891654465592975 22.48208368652231 24000-24999 22.122037227157076 28.59438468062313 27.643619158148464 21.63995893407133 25000-25999 21.75931167213857 29.372806521000793 27.28970904562436 21.57817276123627 26000-26999 21.1625 29.14375 29.493750000000002 20.200000000000003 27000-27999 20.263157894736842 28.91604010025063 29.442355889724308 21.37844611528822 28000-28999 20.408763417144538 30.36318188501691 29.12071754153801 20.107337156300545 29000-29999 22.265001408582965 29.30791623626632 27.814818292797444 20.612264062353272 30000-30999 24.00382912528419 26.720114873758526 27.13892545171712 22.137130549240158 31000-31999 24.265283671224267 27.235580700927237 27.644192990727646 20.854942637120853 32000-32999 24.191798654805815 28.921674983727492 25.29832935560859 21.588197005858103 33000-33999 23.23873121869783 26.67779632721202 28.480801335559264 21.602671118530886 34000-34999 21.75 30.099999999999998 29.349999999999998 18.8 35000-35999 23.45 29.95 26.05 20.549999999999997 36000-36999 19.15 33.1 30.65 17.1 37000-37999 20.324379118094274 27.977698935631018 30.359858084135833 21.338063862138874 38000-38999 19.3 25.6 36.6 18.5 39000-39999 27.0 28.4 25.0 19.6 40000-40999 26.6 23.0 24.7 25.7 41000-41999 12.8 24.4 25.6 37.2 42000-42999 16.900000000000002 30.0 26.5 26.6 43000-43999 19.8 29.099999999999998 26.900000000000002 24.2 44000-44150 30.4635761589404 23.178807947019866 26.490066225165563 19.867549668874172 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.125 15 0.125 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.25 23 0.34090909090909094 24 0.0 25 0.75 26 0.825 27 1.5678571428571428 28 1.3833333333333333 29 1.9305916305916306 30 3.604004329004329 31 6.255375180375181 32 10.64408369408369 33 14.922926746456152 34 15.413439011968416 35 22.289932732034245 36 29.106857548057075 37 28.559156841669047 38 29.586585776053152 39 34.98853620274679 40 29.25856039427737 41 34.86950241338606 42 35.32553210021683 43 35.88073608809246 44 32.18916508707945 45 29.904887840709694 46 28.79514147325484 47 26.195053041787634 48 22.239217496819155 49 22.000849224948972 50 16.52310015740288 51 12.954693461603794 52 11.886876362450437 53 11.657771883287369 54 8.161408815725704 55 6.683055234825496 56 4.602958152958154 57 5.0223735046315685 58 3.340847442617702 59 2.59336917562724 60 1.659001782531194 61 1.3333333333333333 62 0.8409090909090909 63 0.3333333333333333 64 0.5429292929292929 65 0.0 66 0.0 67 0.0 68 0.26785714285714285 69 0.0 70 0.0 71 0.0 72 0.0 73 0.0 74 0.0 75 0.0 76 0.0 77 0.0 78 0.0 79 0.0 80 0.0 81 0.0 82 0.0 83 0.0 84 0.0 85 0.0 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-999 0.0 1000-1999 0.0 2000-2999 0.0 3000-3999 0.0 4000-4999 0.0 5000-5999 0.0 6000-6999 0.0 7000-7999 0.0 8000-8999 0.0 9000-9999 0.0 10000-10999 0.0 11000-11999 0.0 12000-12999 0.0 13000-13999 0.0 14000-14999 0.0 15000-15999 0.0 16000-16999 0.0 17000-17999 0.0 18000-18999 0.0 19000-19999 0.0 20000-20999 0.0 21000-21999 0.0 22000-22999 0.0 23000-23999 0.0 24000-24999 0.0 25000-25999 0.0 26000-26999 0.0 27000-27999 0.0 28000-28999 0.0 29000-29999 0.0 30000-30999 0.0 31000-31999 0.0 32000-32999 0.0 33000-33999 0.0 34000-34999 0.0 35000-35999 0.0 36000-36999 0.0 37000-37999 0.0 38000-38999 0.0 39000-39999 0.0 40000-40999 0.0 41000-41999 0.0 42000-42999 0.0 43000-43999 0.0 44000-44150 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 0-999 2222.0 1000-1999 683.0 2000-2999 290.0 3000-3999 150.0 4000-4999 122.0 5000-5999 103.0 6000-6999 67.0 7000-7999 41.0 8000-8999 53.0 9000-9999 42.0 10000-10999 26.0 11000-11999 38.0 12000-12999 17.0 13000-13999 25.0 14000-14999 19.0 15000-15999 15.0 16000-16999 16.0 17000-17999 14.0 18000-18999 7.0 19000-19999 9.0 20000-20999 2.0 21000-21999 7.0 22000-22999 5.0 23000-23999 2.0 24000-24999 5.0 25000-25999 4.0 26000-26999 0.0 27000-27999 1.0 28000-28999 4.0 29000-29999 1.0 30000-30999 2.0 31000-31999 3.0 32000-32999 1.0 33000-33999 2.0 34000-34999 0.0 35000-35999 0.0 36000-36999 0.0 37000-37999 1.0 38000-38999 0.0 39000-39999 0.0 40000-40999 0.0 41000-41999 0.0 42000-42999 0.0 43000-43999 0.0 44000-44151 1.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 99.925 #Duplication Level Percentage of deduplicated Percentage of total 1 99.97498123592695 99.9 2 0.0 0.0 3 0.0 0.0 4 0.02501876407305479 0.1 5 0.0 0.0 6 0.0 0.0 7 0.0 0.0 8 0.0 0.0 9 0.0 0.0 >10 0.0 0.0 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-999 0.0 0.0 0.0 0.0 0.0 1000-1999 0.0 0.0 0.0 0.0 0.0 2000-2999 0.0 0.0 0.0 0.0 0.0 3000-3999 0.0 0.0 0.0 0.0 0.0 4000-4999 0.0 0.0 0.0 0.0 0.0 5000-5999 0.0 0.0 0.0 0.0 0.0 6000-6999 0.0 0.0 0.0 0.0 0.0 7000-7999 0.0 0.0 0.0 0.0 0.0 8000-8999 0.0 0.0 0.0 0.0 0.0 9000-9999 0.0 0.0 0.0 0.0 0.0 10000-10999 0.0 0.0 0.0 0.0 0.0 11000-11999 0.0 0.0 0.0 0.0 0.0 12000-12999 0.0 0.0 0.0 0.0 0.0 13000-13999 0.0 0.0 0.0 0.0 0.0 14000-14999 0.0 0.0 0.0 0.0 0.0 15000-15999 0.0 0.0 0.0 0.0 0.0 16000-16999 0.0 0.0 0.0 0.0 0.0 17000-17999 0.0 0.0 0.0 0.0 0.0 18000-18999 0.0 0.0 0.0 0.0 0.0 19000-19999 0.0 0.0 0.0 0.0 0.0 20000-20999 0.0 0.0 0.0 0.0 0.0 21000-21999 0.0 0.0 0.0 0.0 0.0 22000-22999 0.0 0.0 0.0 0.0 0.0 23000-23999 0.0 0.0 0.0 0.0 0.0 24000-24999 0.0 0.0 0.0 0.0 0.0 25000-25999 0.0 0.0 0.0 0.0 0.0 26000-26999 0.0 0.0 0.0 0.0 0.0 27000-27999 0.0 0.0 0.0 0.0 0.0 28000-28999 0.0 0.0 0.0 0.0 0.0 29000-29999 0.0 0.0 0.0 0.0 0.0 30000-30999 0.0 0.0 0.0 0.0 0.0 31000-31999 0.0 0.0 0.0 0.0 0.0 32000-32999 0.0 0.0 0.0 0.0 0.0 33000-33999 0.0 0.0 0.0 0.0 0.0 34000-34999 0.0 0.0 0.0 0.0 0.0 35000-35999 0.0 0.0 0.0 0.0 0.0 36000-36999 0.0 0.0 0.0 0.0 0.0 37000-37999 0.0 0.0 0.0 0.0 0.0 38000-38999 0.0 0.0 0.0 0.0 0.0 39000-39999 0.0 0.0 0.0 0.0 0.0 40000-40999 0.0 0.0 0.0 0.0 0.0 41000-41999 0.0 0.0 0.0 0.0 0.0 42000-42999 0.0 0.0 0.0 0.0 0.0 43000-43999 0.0 0.0 0.0 0.0 0.0 44000-44138 0.0 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATGTAC 15 1.0158165E-6 473.35004 3 TTGATAC 10 1.9771003E-4 473.35 1 GATACTT 10 1.9771003E-4 473.35 3 TTATACT 10 1.9771003E-4 473.35 4 TGTTACT 10 1.9771003E-4 473.35 2 TGTTGTA 70 0.0 371.91788 2 GTTGTAC 65 0.0 364.11536 3 ATGTACT 20 3.2053285E-6 355.0125 4 TATACTT 20 3.2053285E-6 355.0125 5 TGTACTT 140 0.0 321.20178 5 TTGATGC 15 6.662547E-4 315.56668 1 TTATGCT 15 6.662547E-4 315.56668 4 TTGTACT 105 0.0 315.56668 4 TGTTATG 15 6.662547E-4 315.56668 2 TTGGTAC 15 6.662547E-4 315.56668 1 GTTATGC 15 6.662547E-4 315.56668 3 GTTATAC 15 6.662547E-4 315.56668 3 TACTTCG 160 0.0 310.63593 7 GTACTTC 150 0.0 299.78833 6 ACTTCGT 160 0.0 295.84375 8 >>END_MODULE