##FastQC 0.12.1 >>Basic Statistics pass #Measure Value Filename Trimmomatic on SRR13615650_reverse _R1 paired_.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 13602338 Total Bases 858.1 Mbp Sequences flagged as poor quality 0 Sequence length 36-64 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 35.25593181113423 36.0 36.0 36.0 36.0 36.0 2 35.25359941798241 36.0 36.0 36.0 36.0 36.0 3 35.257013389904 36.0 36.0 36.0 36.0 36.0 4 35.25675152315727 36.0 36.0 36.0 36.0 36.0 5 35.25219010143697 36.0 36.0 36.0 36.0 36.0 6 35.25186508378192 36.0 36.0 36.0 36.0 36.0 7 35.245497060872914 36.0 36.0 36.0 36.0 36.0 8 35.24837884487211 36.0 36.0 36.0 36.0 36.0 9 35.2550985720249 36.0 36.0 36.0 36.0 36.0 10 35.244251980799184 36.0 36.0 36.0 36.0 36.0 11 35.222743840066315 36.0 36.0 36.0 36.0 36.0 12 35.22114352694368 36.0 36.0 36.0 36.0 36.0 13 35.20874970170569 36.0 36.0 36.0 36.0 36.0 14 35.204178281704216 36.0 36.0 36.0 36.0 36.0 15 35.200117656244096 36.0 36.0 36.0 36.0 36.0 16 35.20276080479694 36.0 36.0 36.0 36.0 36.0 17 35.196403956437486 36.0 36.0 36.0 36.0 36.0 18 35.19916789304897 36.0 36.0 36.0 36.0 36.0 19 35.186881696367195 36.0 36.0 36.0 36.0 36.0 20 35.18364747295649 36.0 36.0 36.0 36.0 36.0 21 35.18569851741664 36.0 36.0 36.0 36.0 36.0 22 35.1818217574067 36.0 36.0 36.0 36.0 36.0 23 35.17203549860326 36.0 36.0 36.0 36.0 36.0 24 35.16976118370239 36.0 36.0 36.0 36.0 36.0 25 35.149599355640184 36.0 36.0 36.0 36.0 36.0 26 35.13007977011011 36.0 36.0 36.0 36.0 36.0 27 35.10078039525264 36.0 36.0 36.0 36.0 36.0 28 35.095498141569486 36.0 36.0 36.0 36.0 36.0 29 35.082176534651616 36.0 36.0 36.0 36.0 36.0 30 35.04889924070406 36.0 36.0 36.0 36.0 36.0 31 35.035959921007695 36.0 36.0 36.0 36.0 36.0 32 35.01644099712858 36.0 36.0 36.0 36.0 36.0 33 35.003792215720566 36.0 36.0 36.0 36.0 36.0 34 34.99067851423777 36.0 36.0 36.0 36.0 36.0 35 34.97649926064181 36.0 36.0 36.0 36.0 36.0 36 34.955246737729944 36.0 36.0 36.0 36.0 36.0 37 34.93205682183831 36.0 36.0 36.0 36.0 36.0 38 34.91026288991195 36.0 36.0 36.0 32.0 36.0 39 34.872015894995805 36.0 36.0 36.0 32.0 36.0 40 34.847550193225906 36.0 36.0 36.0 32.0 36.0 41 34.84915040549801 36.0 36.0 36.0 32.0 36.0 42 34.81529391485448 36.0 36.0 36.0 32.0 36.0 43 34.80386126299538 36.0 36.0 36.0 32.0 36.0 44 34.796083821891486 36.0 36.0 36.0 32.0 36.0 45 34.76017579404086 36.0 36.0 36.0 32.0 36.0 46 34.708319115206294 36.0 36.0 36.0 32.0 36.0 47 34.69448795616861 36.0 36.0 36.0 32.0 36.0 48 34.66375823911571 36.0 36.0 36.0 32.0 36.0 49 34.64898529738607 36.0 36.0 36.0 32.0 36.0 50 34.64506546864858 36.0 36.0 36.0 32.0 36.0 51 34.630021500172035 36.0 36.0 36.0 32.0 36.0 52 34.611952222253166 36.0 36.0 36.0 32.0 36.0 53 34.60264964813595 36.0 36.0 36.0 32.0 36.0 54 34.59398488041586 36.0 36.0 36.0 32.0 36.0 55 34.56363666003541 36.0 36.0 36.0 32.0 36.0 56 34.557615111206054 36.0 36.0 36.0 32.0 36.0 57 34.53579593005158 36.0 36.0 36.0 32.0 36.0 58 34.53186168174002 36.0 36.0 36.0 32.0 36.0 59 34.51802725417532 36.0 36.0 36.0 32.0 36.0 60 34.5342800257606 36.0 36.0 36.0 32.0 36.0 61 34.53152611394628 36.0 36.0 36.0 32.0 36.0 62 34.53827062642353 36.0 36.0 36.0 32.0 36.0 63 34.671905293975584 36.0 36.0 36.0 32.0 36.0 64 34.79981862439703 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 20.0 21 135.0 22 734.0 23 2952.0 24 9152.0 25 23029.0 26 47815.0 27 85250.0 28 132691.0 29 189493.0 30 255256.0 31 336938.0 32 458734.0 33 693891.0 34 1397292.0 35 7510816.0 36 2458139.0 >>END_MODULE >>Per base sequence content pass #Base G A T C 1 21.958295824178894 28.33438034264222 31.68269038139688 18.024633451782005 2 22.174885873115237 27.552021972940377 30.968693632677397 19.30439852126699 3 22.695170973052743 27.297712532132667 30.166475986755675 19.840640508058915 4 22.489104671610978 26.840670893446333 30.1888303034224 20.48139413152029 5 22.4342424388123 26.565460696615727 29.652778727381722 21.34751813719025 6 22.723344546487738 26.5362851054967 29.318258493731044 21.422111854284523 7 22.485538058618815 26.334231076702437 29.47185811998511 21.708372744693637 8 22.472988833828534 26.098030141347987 29.32114514920147 22.107835875622005 9 22.562410781219985 26.318721297164693 29.069826512779613 22.049041408835713 10 22.41739899616652 26.23864011969779 29.183710408038195 22.160250476097495 11 22.40775680632745 26.189528514366355 28.979997053416962 22.422717625889234 12 22.759240312262516 26.159642583265313 28.829100842190126 22.252016262282044 13 22.380418504906917 26.43801788383228 28.996083730388328 22.185479880872474 14 22.444102850857348 26.251639525464114 28.847671552203202 22.456586071475336 15 22.576613770025915 26.487179502260087 28.511216336507445 22.42499039120655 16 22.559327028093627 26.566345876176793 28.736710269314624 22.13761682641496 17 22.670449662412988 26.349158901480497 28.46080628742068 22.519585148685834 18 22.65366441513651 26.778142613704574 28.31370789206447 22.25448507909444 19 22.589283948551532 26.83766507356571 28.40961747859334 22.163433499289418 20 22.712810165704752 26.658119032906797 28.084968576785897 22.544102224602554 21 22.736414946139703 27.003914358735937 27.922638850047214 22.337031845077146 22 22.966554383120165 26.768888584035594 28.010109562657316 22.25444747018693 23 22.853213251115477 26.80400487096386 27.79876043909251 22.544021438828146 24 23.26109697486861 26.888691812244726 27.630721401236997 22.21948981164967 25 22.999837158754776 26.865416305665146 27.826091431499528 22.30865510408055 26 23.075469131945084 26.76524104468011 27.530908489404325 22.62838133397048 27 23.36928469160263 26.838685724893264 27.637116858149525 22.154912725354585 28 23.085563083260514 26.877560523674187 27.85965915214585 22.177217240919443 29 23.44078816827158 26.70427949799273 27.512850242014697 22.342082091720993 30 23.35354879187694 26.860026935810094 27.621747648704044 22.164676623608923 31 23.525120432878314 26.86867164511036 27.48747884038899 22.118729081622337 32 23.683136589265157 26.566591597867077 27.449081908801592 22.301189904066177 33 23.74913093121754 26.89712100311986 27.312936000146447 22.040812065516153 34 23.692046513279482 27.029302489747447 27.365696033655674 21.912954963317393 35 23.72097270189506 26.93221433401021 27.285151108063555 22.061661856031172 36 23.842470897138952 27.097639092542853 27.214973182617353 21.844916827700843 37 23.76157065889756 27.204333420361326 27.36407356344771 21.670022357293398 38 24.109631211800796 27.027080744024822 27.0772180012997 21.78607004287468 39 24.202765926009512 27.31693333083883 27.014557947253277 21.465742795898386 40 24.304612210859297 27.166750012253093 27.188492339146396 21.340145437741214 41 24.200962676733365 27.133853777799672 27.189629380962337 21.475554164504622 42 24.54099403040429 27.334002418417164 26.926382463664154 21.198621087514397 43 24.324088052144088 27.36382563644711 27.206675102567967 21.10541120884083 44 24.510364605777948 27.56609905129668 26.70595457190661 21.21758177101876 45 24.833269807212762 27.561711757398626 26.648828098317733 20.956190337070876 46 24.507645499729627 27.78442879007221 26.701831058534253 21.00609465166392 47 24.687772749582294 27.386149373679974 26.67163892933736 21.25443894740037 48 24.673675848847534 27.59691282075155 26.630834995167575 21.098576335233343 49 24.8104403262889 27.13682451134689 27.14498106285831 20.9077540995059 50 24.620207179900692 27.00082315192793 27.049030336628345 21.329939331543038 51 24.983688583622893 26.78813972756446 27.149484088514132 21.078687600298522 52 25.114790905602334 26.814164509867172 26.998515945898387 21.072528638632104 53 25.318303485722115 26.757095622151034 27.036412927938642 20.88818796418821 54 25.15911174648895 27.07015753477835 27.04189728273837 20.728833435994332 55 24.735027651320856 27.01805117968642 27.323154816415148 20.923766352577577 56 25.068087185802728 26.344170948627816 27.437071923731782 21.150669941837677 57 25.39214569034919 26.084265264897056 27.204374252025538 21.319214792728218 58 24.78375831838759 26.453439180026255 27.495664991209445 21.267137510376706 59 25.281689727162828 25.931558280180816 27.17677416221885 21.609977830437504 60 25.09786107019851 26.597088590054447 27.112328770558975 21.192721569188073 61 25.015488754015525 26.558387484820077 27.825245598421215 20.600878162743175 62 24.427767174687524 26.29415471834372 27.827625663911437 21.45045244305732 63 25.266535277199935 26.468689451497195 27.11812806073982 21.146647210563046 64 26.057969203447062 25.465524841470383 27.847050794364808 20.629455160717743 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 10887.0 1 6330.0 2 1745.5 3 1600.5 4 1401.5 5 1357.5 6 1412.5 7 1501.5 8 1617.5 9 1883.0 10 2446.5 11 2869.0 12 3738.5 13 5869.5 14 7349.5 15 10118.0 16 16935.5 17 21680.5 18 28788.5 19 35777.5 20 46492.0 21 70663.0 22 85160.5 23 104001.5 24 142093.0 25 163913.5 26 189809.0 27 239886.5 28 269031.0 29 301025.5 30 359093.0 31 391006.5 32 419600.0 33 447761.0 34 475731.0 35 524869.0 36 551746.5 37 580093.5 38 627311.0 39 653120.0 40 672589.0 41 695944.5 42 707515.5 43 719261.5 44 731035.5 45 740851.0 46 746828.5 47 749643.0 48 747398.5 49 731895.5 50 720196.5 51 694475.5 52 639371.0 53 602325.0 54 563595.5 55 502057.5 56 465544.5 57 424744.0 58 384929.0 59 351345.5 60 303725.5 61 280693.5 62 258913.5 63 209344.0 64 176006.5 65 158197.0 66 133443.0 67 122550.0 68 105604.5 69 88673.0 70 75126.0 71 53708.0 72 43435.5 73 37018.5 74 27982.0 75 23757.0 76 22146.0 77 18469.5 78 15708.5 79 13380.0 80 10535.0 81 9705.5 82 6236.5 83 2725.5 84 1964.0 85 1054.5 86 732.0 87 577.5 88 324.0 89 215.5 90 146.0 91 68.5 92 56.5 93 47.5 94 41.5 95 49.0 96 70.5 97 95.0 98 161.0 99 12910.5 100 25604.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 7.57222765674548E-4 2 0.0011248066325068528 3 9.998281177838692E-4 4 0.0013085985659230053 5 0.001293895211249713 6 0.0011689166965267294 7 6.175408962782722E-4 8 6.83705992308087E-4 9 0.0017717542381317094 10 6.0283754160498E-4 11 0.0010439381818037458 12 4.7785902688199627E-4 13 7.939811523577785E-4 14 5.807825095950417E-4 15 0.001573258950042265 16 7.792777976844863E-4 17 4.925623815552885E-4 18 0.0013306535979329436 19 0.001065993213813684 20 9.77773085773931E-4 21 8.086845070310707E-4 22 0.0012277301152198983 23 7.498710883379019E-4 24 0.001360060307279528 25 9.77773085773931E-4 26 6.469476056248565E-4 27 0.0011983234058733137 28 0.0010292348271304535 29 4.7785902688199627E-4 30 0.002727472291895702 31 0.0026686588732025333 32 0.0010953999231602684 33 9.924764404472231E-4 34 8.454428937143012E-4 35 0.001360060307279528 36 0.0011248066325068528 37 0.0013168052450927671 38 0.0016047198196000479 39 7.218302078576374E-4 40 0.0022847346925539387 41 0.0031268169092358794 42 8.338282189901499E-4 43 3.9132426716224564E-4 44 8.4960210547655E-4 45 0.0013084533999496283 46 9.690394843644739E-4 47 0.0016434106782607562 48 8.005798570253329E-4 49 8.797665546902779E-4 50 9.97431800600634E-4 51 9.052386386327337E-4 52 0.0013507085035219723 53 5.72509032284166E-4 54 7.372185313086343E-4 55 7.416999716995104E-4 56 9.639469835378067E-4 57 4.4582031720506634E-4 58 6.966021391321104E-4 59 6.265867820735089E-4 60 9.013232130150445E-4 61 2.5098816786873004E-4 62 2.2007848313106284E-4 63 3.011935269072426E-4 64 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 36 8832.0 37 8580.0 38 8326.0 39 8285.0 40 8199.0 41 8164.0 42 8197.0 43 8007.0 44 8327.0 45 8880.0 46 10049.0 47 18270.0 48 77573.0 49 78404.0 50 78072.0 51 77904.0 52 78039.0 53 78311.0 54 78680.0 55 79461.0 56 78358.0 57 9117.0 58 8718.0 59 8566.0 60 9414.0 61 26871.0 62 106261.0 63 980950.0 64 1.1635523E7 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 71.56483598185372 #Duplication Level Percentage of total 1 60.298719087040695 2 15.587051144146086 3 5.064675749360213 4 2.5172588394446223 5 1.5861894924162976 6 1.1819453509679394 7 0.8849358213472847 8 0.6904833772400158 9 0.5421889375723987 >10 6.042844561566382 >50 1.618310667274305 >100 2.289633944446602 >500 0.7528647009320529 >1k 0.7233150991856171 >5k 0.04025791367375122 >10k+ 0.1793253133859506 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 24183 0.17778561303211257 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence PolyA PolyG 1 0.00378611382837274 2.205503200993829E-5 0.0 1.4703354673292195E-5 0.01554144588966985 0.18976149541350906 2 0.006087188834742969 3.675838668323049E-5 0.0 2.205503200993829E-5 0.01959222010216185 0.189783550445519 3 0.009226355057490853 4.411006401987658E-5 0.0 3.675838668323049E-5 0.023348927221188004 0.18981295715486557 4 0.011703870319940586 4.411006401987658E-5 0.0 4.411006401987658E-5 0.02603228944906383 0.18984236386421216 5 0.015379708988263635 4.411006401987658E-5 0.0 4.411006401987658E-5 0.029318489218544637 0.1898497155415488 6 0.01887175572317053 4.411006401987658E-5 0.0 5.881341869316878E-5 0.0322150500891832 0.1898644188962221 7 0.034479366708870196 4.411006401987658E-5 0.0 7.351677336646098E-5 0.03500133579977207 0.1898938256055687 8 0.08036118496687848 5.146174135652268E-5 0.0 8.086845070310706E-5 0.03771410473699448 0.18991588063757864 9 0.1786531109578368 7.351677336646098E-5 0.0 8.086845070310706E-5 0.04040481864220695 0.18992323231491529 10 0.29146459968867117 8.822012803975316E-5 0.0 8.086845070310706E-5 0.04344106138224179 0.18995263902426185 11 0.531732118404939 9.557180537639926E-5 0.0 8.822012803975316E-5 0.0463302705755437 0.19000410076561838 12 0.6658487680573737 9.557180537639926E-5 0.0 8.822012803975316E-5 0.0496311736996978 0.19010702424833142 13 0.9123063990910975 9.557180537639926E-5 0.0 1.1027516004969146E-4 0.05302029695189165 0.19015848598968796 14 1.1139482050806266 9.557180537639926E-5 0.0 1.1027516004969146E-4 0.05749746844990913 0.19018054102169787 15 1.309039666563204 1.0292348271304536E-4 0.0 1.1762683738633756E-4 0.06223194865470921 0.19018054102169787 16 1.580816474344337 1.0292348271304536E-4 7.3516773366460975E-6 1.2497851472298365E-4 0.06615039267514158 0.19018789269903452 17 1.8466531268374597 1.0292348271304536E-4 1.4703354673292195E-5 1.2497851472298365E-4 0.07020851856497023 0.19022465108571776 18 2.153276885194295 1.0292348271304536E-4 1.4703354673292195E-5 1.3233019205962976E-4 0.07505327392982 0.19028346450441094 19 2.478507738890182 1.0292348271304536E-4 2.205503200993829E-5 1.3968186939627584E-4 0.08087580238044371 0.19032022289109415 20 2.8449520957353065 1.0292348271304536E-4 2.205503200993829E-5 1.5438522406956804E-4 0.08733057508201898 0.19033492624576745 21 3.2134475705573555 1.0292348271304536E-4 2.205503200993829E-5 1.6173690140621413E-4 0.09338835720741537 0.19036433295511404 22 3.59547748335617 1.0292348271304536E-4 2.205503200993829E-5 1.6173690140621413E-4 0.09829192599095832 0.19040844301913393 23 3.965406535258865 1.0292348271304536E-4 2.205503200993829E-5 1.6173690140621413E-4 0.10286466929435219 0.19043049805114384 24 4.338210093000189 1.0292348271304536E-4 2.205503200993829E-5 1.7644025607950633E-4 0.10687868512016097 0.19047460811516373 25 4.693832780805771 1.1027516004969146E-4 2.205503200993829E-5 1.7644025607950633E-4 0.11049571036979083 0.19048931146983702 26 5.06936381083899 1.1027516004969146E-4 2.205503200993829E-5 1.9849528808944464E-4 0.11453913290494619 0.19052606985652026 27 5.435536155622659 1.1027516004969146E-4 2.205503200993829E-5 2.0584696542609072E-4 0.11835465344266552 0.19057753159787677 28 5.808597022070765 1.2497851472298365E-4 2.205503200993829E-5 2.0584696542609072E-4 0.1217805350815426 0.1905995866298867 29 6.183966315202578 1.2497851472298365E-4 2.205503200993829E-5 2.131986427627368E-4 0.12488294291760725 0.19060693830722336 30 6.567672410434147 1.2497851472298365E-4 2.205503200993829E-5 2.2055032009938292E-4 0.12849261648990049 0.19063634501656995 31 6.963957225588719 1.2497851472298365E-4 2.940670934658439E-5 2.2055032009938292E-4 0.131764112904708 0.1906584000485799 32 7.373475059949253 1.2497851472298365E-4 2.940670934658439E-5 2.2055032009938292E-4 0.1349547408688124 0.1906804550805898 33 7.800791305141807 1.3233019205962976E-4 2.940670934658439E-5 2.2055032009938292E-4 0.13839532586236278 0.1907098617899364 34 8.236922211461 1.4703354673292196E-4 2.940670934658439E-5 2.2055032009938292E-4 0.14191677930661625 0.1907245651446097 35 8.679309395193679 1.4703354673292196E-4 2.940670934658439E-5 2.499570294459673E-4 0.1454161777188598 0.19077602688596623 36 9.13999490381727 1.5438522406956804E-4 2.940670934658439E-5 2.499570294459673E-4 0.14824657349346854 0.1908054335953128 37 9.60587804831787 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